At the research level, the groups involved with BioME belong to different brazilian universities, such as UFRN, USP, UFRGS and UFMG, producing cutting- edge bioinformatics science.

UFRGS USP UFRN UFMG BioME PPg-Bioinfo Dep. de Biofísica e Farmacologia Dep. de Biologia Dep. de Bioquímica Dep. de Engenharia Elétrica Dep. de Estatística Dep. de Engenharia de Computação e Automação Dep. de Farmácia Dep. de Engenharia Biomédica Instituto do Cérebro Instituto Metrópole Digital Dep. de Bioquímica e Imunologia Instituto de Física Dep. de Biologia Molecular e Biotecnologia Instituto de Matemática e Estatística


In the first year (2016), BioME´s researchers published over 60 articles in indexed journals in the fields of cancer biology, systems modeling, systems biology, genomics, proteomics, molecular evolution, structural bioinformatics, etc.

o A computational environment to support research in sugarcane agriculture
Computers and Electronics in Agriculture, v. 130, p. 13-19
o A genetic network that suppresses genome rearrangements in Saccharomyces cerevisiae and contains defects in cancers
Nature Communications, v. 7, 1256
o A genomic case study of desmoplastic small round cell tumor: comprehensive analysis reveals insights into potential therapeutic targets and development of a monitoring tool for a rare and aggressive disease
Human Genomics, v. 10, p. 36
o A multi-level approach using genetic algorithms in an ensemble of Least Squares Support Vector Machines
Knowledge-Based Systems, v. 5, p. 1-11
o A Naturalistic Assessment of the Organization of Children’s Memories Predicts Cognitive Functioning and Reading Ability
Mind Brain and Education, v. 10, p. 184-195
o A New Approach for Identification of Cancer-related Pathways using Protein Networks and Genomic Data
Cancer Informatics, v. 14, p. 139-149
o A provenance model based on declarative specifications for intensive data analyses in hemotherapy information systems
Future Generation Computer Systems, v. 59, p. 105-113
o A quantum biochemistry model of the interaction between the estrogen receptor and the two antagonists used in breast cancer treatment
Computational and Theoretical Chemistry, v. 1089, p. 21-27
o A quantum chemistry investigation of a potential inhibitory drug against the dengue virus
RSC Advances: an international journal to further the chemical sciences, v. 6, p. 56562-56570
o A Respiration-Coupled Rhythm in the Rat Hippocampus Independent of Theta and Slow Oscillations
The Journal of Neuroscience, v. 36, p. 5338-5352
o A subdose of fluconazole alters the virulence of during murine cryptococcosis and modulates type I interferon expression
Medical Mycology (Oxford. Print), myw056-5
o Activity of pyrrolizidine alkaloids against biofilm formation and Trichomonas vaginalis
Biomedicine & Pharmacotherapy, v. 83, p. 323-329
o Activity-Independent Effects of CREB on Neuronal Survival and Differentiation during Mouse Cerebral Cortex Development
Cerebral Cortex (New York, N.Y. 1991), v. 27, p. 1
o An alternative nested-PCR assay for the detection of Toxoplasma gondii strains based on GRA7 gene sequences
Acta Tropica, p. 120-124
o Anti-Inflammatory Properties in Lipopolysaccharide-Stimulated RAW 264.7 Macrophages
Journal of Medicinal Food, jmf.2016.0047-00
o Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types
International Journal of Genomics, v. 2016, p. 1-7
o Characterization of the particulate matter and relationship between buccal micronucleus and urinary 1-hydroxypyrene levels among cashew nut roasting workers
Environmental Pollution (1987), v. 220, p. 659
o Charge transport properties of a twisted DNA molecule: a renormalization approach
Chemical Physics (Print), v. 478, p. 48-54
o Cockayne syndrome-derived neurons display reduced synapse density and altered neural network synchrony
Human Molecular Genetics (Print), v. 2016, ddw008
o Comparative protein profiling of B16 mouse melanoma cells susceptible and non-susceptible to alphavirus infection: Effect of the tumor microenvironment
Cancer Biology & Therapy, v. 1, p. 1-16
o Compatibility study between ferulic acid and excipients used in cosmetic formulations by TG/DTG, DSC and FTIR
Journal of Thermal Analysis and Calorimetry
o Complex Correntropy: Probabilistic Interpretation and Application to Complex-Valued Data
IEEE Signal Processing Letters, v. PP, p. 1-1
o Computational Tracking of Mental Health in Youth: Latin American Contributions to a Low-Cost and Effective Solution for Early Psychiatric Diagnosis
New Directions for Child and Adolescent Development, v. 2016, p. 59-69
o Conformational, Optoelectronic and Vibrational Properties of the Entacapone Molecule: A Quantum Chemistry Study
Journal of Nanoscience and Nanotechnology (Print), v. 16, p. 4825-4834
o Critical properties of the contact process on a scale-free homophilic network
Journal of Statistical Mechanics, v. 2016, 043202
o Cyclostationary Correntropy: definition and applications
Expert Systems with Applications, v. 69, p. 110-117
o DFT Calculations with van der Waals Interactions of Hydrated Calcium Carbonate Crystals CaCO ·(H O, 6H O): Structural, Electronic, Optical, and Vibrational Properties
The Journal of Physical Chemistry A, v. 120, p. 5752
o Differential Expression of Inflammation-Related Genes in Children with Down Syndrome
Mediators of Inflammation (Print), v. 2016, p. 1-8
o Effect of hydroxypropyl methylcellulose on beta cyclodextrin complexation of praziquantel in solution and in solid state
Journal of Inclusion Phenomena and Macrocyclic Chemistry
o Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes
BMC Genomics, v. 17, p. 10101000-10101000
o ExoMeg1: a new exonuclease from metagenomic library
Scientific Reports, v. 6, p. 19712
o GeLC-MS-based proteomics of Chromobacterium violaceum: comparison of proteome changes elicited by hydrogen peroxide
Scientific Reports, v. 6, 28174
o Gene Expression Profile of NF-κB, Nrf2, Glycolytic, and p53 Pathways During the SH-SY5Y Neuronal Differentiation Mediated by Retinoic Acid
Molecular Neurobiology, v. 53, p. 423-435
o Genome instability biomarkers in children with non-syndromic orofacial clefts
Toxicology Letters, v. 258, p. S295
o Gluten-specific antibodies of celiac disease gut plasma cells recognize long proteolytic fragments that typically harbor T-cell epitopes
Scientific Reports, v. 6, 25565
o Hippocampal respiration-driven rhythm distinct from theta oscillations in awake mice
The Journal of Neuroscience, v. 36, p. 162-177
o Human Brain Expansion during Evolution Is Independent of Fire Control and Cooking
Frontiers in Neuroscience, v. 10, p. 1-11
o Impaired theta-gamma coupling in APP-deficient mice
Scientific Reports, v. 6, 21948
o Live Imaging of Adult Neural Stem Cells in Rodents
Frontiers in Neuroscience, v. 10, p. 78
o Longitudinal study of patients with chronic Chagas cardiomyopathy in Brazil (SaMi-Trop project): a cohort profile
BMJ Open, v. 6, e011181
o Machine Learning Algorithms for Automatic Classification of Marmoset Vocalizations
Plos One, v. 11, e0163041
o Macrophage Migration Inhibitory Factor (MIF): Biological Activities and Relation with Cancer
o Metagenomic analysis of sediments under seaports influence in the Equatorial Atlantic Ocean
Science of the Total Environment, v. 557-558, p. 888-900
o MetaMass, a tool for meta-analysis of subcellular proteomics data
Nature Methods, v. 1, p. 1
o Methylation effect on the ohmic resistance of a poly-GC DNA-like chain
Physics Letters. A (Print), v. 380, p. 3559-3563
o Motor Coordination Correlates with Academic Achievement and Cognitive Function in Children
Frontiers in Psychology, v. 7, p. 318
o New structural insights into Golgi Reassembly and Stacking Protein (GRASP) in solution
Scientific Reports, v. 6, p. 29976-29982
o NFAT1 Transcription Factor Regulates Cell Cycle Progression and Cyclin E Expression in B Lymphocytes
Cell Cycle (Georgetown, Tex.), v. 11
o Novel Virtual Environment for Alternative Treatment of Children with Cerebral Palsy
Computational Intelligence and Neuroscience, v. 2016, p. 1-10
o Object recognition impairment and rescue by a dopamine D2 antagonist in hyperdopaminergic mice
Behavioural Brain Research, v. 308, p. 211-216
o On the photovoltaic effect in local field potential recordings
Neurophotonics, v. 3, 015002
o Panorama de oportunidades para os egressos do ensino superior no Brasil: o papel da inovação na criação de novos mercados de trabalho / Overview of opportunities for graduates of higher education in Brazil: the role of innovation in the creation of new job markets
Ensaio (Rio de Janeiro. Online), v. 24, p. 179-198
o Pathogenicity and phenotypic sulfadiazine resistance of Toxoplasma gondii isolates obtained from livestock in northeastern Brazil
Memórias do Instituto Oswaldo Cruz (Online), v. 111, p. 391-398
o Phytochemical study and anti-inflammatory and antioxidant potential of Spondias mombin leaves
Revista Brasileira de Farmacognosia (Impresso), v. 26, p. 304-311
o Proximity Labeling Reveals Molecular Determinants of FGFR4 Endosomal Transport
Journal of Proteome Research (Print), v. 1, acs.jproteome.6b00652
o Psychosis and the Control of Lucid Dreaming
Frontiers in Psychology, v. 7, p. 294
o Quantitative Proteomics of Gut-Derived Th1 and Th1/Th17 Clones Reveal the Presence of CD28+ NKG2D- Th1 Cytotoxic CD4+ T cells
Molecular & Cellular Proteomics, v. 15, p. 1007-1016
o Repertoires of Spike Avalanches Are Modulated by Behavior and Novelty
Frontiers in Neural Circuits, v. 10, p. 16
o S100B protein and neuron-specific enolase as predictors of cognitive dysfunction after coronary artery bypass graft surgery
European Journal of Anaesthesiology (Print), v. 33, p. 1
o Secondary metabolite gene clusters in the entomopathogen fungus Metarhizium anisopliae: genome identification and patterns of expression in a cuticle infection model
BMC Genomics, v. 17, p. 736
o Stearylamine-Containing Cationic Nanoemulsion as a Promising Carrier for Gene Delivery
Journal of Nanoscience and Nanotechnology (Print), v. 16, p. 1339-1345
o Supramolecular aggregates of oligosaccharides with co-solvents in ternary systems for the solubilizing approach of triamcinolone
Carbohydrate Polymers
o The putative autophagy regulator Atg7 affects the physiology and pathogenic mechanisms of Cryptococcus neoformans
Future Microbiology (Print), v. 107, fmb-2016-0090
o Transcriptome analysis reveals manifold mechanisms of cyst development in ADPKD
Human Genomics, v. 10, p. 37
o Visualization properties for data quality visual assessment: An exploratory case study
Information Visualization (Print), v. 1, p. 1-20
o Water mutagenic potential assessment on a semiarid aquatic ecosystem under influence of heavy metals and natural radioactivity using micronuclei test
Environmental Science and Pollution Research International, v. 1, p. 1-10
o XPC deficiency is related to APE1 and OGG1 expression and functions
Mutation Research (Print), v. 784


News & Press

© Copyright 2017 - Todos os Direitos Reservados.